ENSDARG00000054253


Danio rerio

Features
Gene ID: ENSDARG00000054253
  
Biological name :sobpa
  
Synonyms : sine oculis binding protein homolog (Drosophila) a / sobpa
  
Possible biological names infered from orthology : A7XYQ1 / Q0P5V2 / sine oculis binding protein homolog / SOBP
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 32740509
Gene end: 32796029
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000070897
Ensembl peptide - ENSDARP00000136510
NCBI entrez gene - 573683     See in Manteia.
RefSeq - NM_001098618
RefSeq Peptide - NP_001092088
swissprot - B8JKJ8
swissprot - A0A0R4INM1
ZFIN ID - ZDB-GENE-090313-313
Ensembl - ENSDARG00000054253
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SOBPENSGALG00000043047Gallus gallus
 SOBPENSG00000112320Homo sapiens
 SobpENSMUSG00000038248Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sobpb / A7XYJ6 / sine oculis binding protein homolog (Drosophila) bENSDARG0000001738628


Protein motifs (from Interpro)
Interpro ID Name
 IPR026092  Retinoic acid-induced protein 2/sine oculis-binding protein homologue


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr