ENSGALG00000043047


Gallus gallus

Features
Gene ID: ENSGALG00000043047
  
Biological name :SOBP
  
Synonyms : A7XYH5 / Sine oculis-binding protein homolog / SOBP
  
Possible biological names infered from orthology : A7XYQ1 / Q0P5V2
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 67883237
Gene end: 67992910
  
Corresponding Affymetrix probe sets: Gga.14738.1.S1_at (Chicken Array)   Gga.15802.1.S1_s_at (Chicken Array)   GgaAffx.24647.1.S1_at (Chicken Array)   GgaAffx.9759.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000054799
NCBI entrez gene - 421775     See in Manteia.
RefSeq - XM_015284515
RefSeq - NM_001110177
RefSeq - XM_015284514
RefSeq Peptide - NP_001103647
swissprot - V5K679
swissprot - A7XYH5
Ensembl - ENSGALG00000043047
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sobpaENSDARG00000054253Danio rerio
 SOBPENSG00000112320Homo sapiens
 SobpENSMUSG00000038248Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026092  Retinoic acid-induced protein 2/sine oculis-binding protein homologue


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007605 sensory perception of sound IEA
 biological_processGO:0007626 locomotory behavior IEA
 biological_processGO:0042472 inner ear morphogenesis IEA
 biological_processGO:0050890 cognition IEA
 biological_processGO:0090102 cochlea development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0032184 SUMO polymer binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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