ENSDARG00000055504


Danio rerio

Features
Gene ID: ENSDARG00000055504
  
Biological name :si:ch211-212k18.7
  
Synonyms : si:ch211-212k18.7
  
Possible biological names infered from orthology : CD68 / CD68 molecule / Macrosialin / P31996 / P34810
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 19482084
Gene end: 19491627
  
Corresponding Affymetrix probe sets: Dr.4268.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000072334
Ensembl peptide - ENSDARP00000142961
Ensembl peptide - ENSDARP00000142699
NCBI entrez gene - 100000085     See in Manteia.
RefSeq - XM_002662803
RefSeq - XM_021471872
swissprot - E7F3A5
swissprot - A0A1D5NSZ0
swissprot - A0A1D5NS89
ZFIN ID - ZDB-GENE-030131-1312
Ensembl - ENSDARG00000055504
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CD68ENSG00000129226Homo sapiens
 Cd68ENSMUSG00000018774Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lamp2 / lysosomal-associated membrane protein 2 / P13473* / P17047* / Lysosome-associated membrane glycoprotein 2 *ENSDARG0000001491424
LAMP1 / lysosomal associated membrane protein 1 / P11279*ENSDARG0000010018122
lamp1 / lysosomal-associated membrane protein 1 / P11279* / P11438* / Lysosome-associated membrane glycoprotein 1 *ENSDARG0000009261020


Protein motifs (from Interpro)
Interpro ID Name
 IPR002000  Lysosome-associated membrane glycoprotein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr