ENSDARG00000055561


Danio rerio

Features
Gene ID: ENSDARG00000055561
  
Biological name :c1galt1b
  
Synonyms : c1galt1b / core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 39190402
Gene end: 39199070
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000072404
Ensembl peptide - ENSDARP00000118776
swissprot - E9QI18
swissprot - F1QJQ5
ZFIN ID - ZDB-GENE-030131-9075
Ensembl - ENSDARG00000055561
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
c1galt1a / core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1aENSDARG0000005558566
C1GALT1 (1 of many) / core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 / Q9NS00* / C1GALT1*ENSDARG0000009909844
si:dkey-202e17.1 / C1GALT1 (1 of many) / Q9JJ06* / Q9NS00* / C1GALT1* / Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 * / core 1 synthase, glycoprotein-N-acetylgalactosa...ENSDARG0000006227840
c1galt1c1 / C1GALT1-specific chaperone 1 / P0DN25* / Q96EU7* / Q9JMG2* / C1GALT1C1L* / C1GALT1-specific chaperone 1 like*ENSDARG0000003633519
b3glcta / beta 3-glucosyltransferase a / Q8BHT6* / Q6Y288* / B3GLCT* / beta 3-glucosyltransferase* / Beta-1,3-glucosyltransferase *ENSDARG0000007391715
b3glctb / beta 3-glucosyltransferase b / Q8BHT6* / Q6Y288* / B3GLCT* / beta 3-glucosyltransferase* / Beta-1,3-glucosyltransferase *ENSDARG0000007774015


Protein motifs (from Interpro)
Interpro ID Name
 IPR003378  Fringe-like
 IPR026842  Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016263 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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