ENSDARG00000062278


Danio rerio

Features
Gene ID: ENSDARG00000062278
  
Biological name :C1GALT1 (1 of many)
  
Synonyms : C1GALT1 (1 of many) / si:dkey-202e17.1
  
Possible biological names infered from orthology : C1GALT1 / core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 / Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 / Q9JJ06 / Q9NS00
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 25512797
Gene end: 25519612
  
Corresponding Affymetrix probe sets: Dr.1989.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121379
Ensembl peptide - ENSDARP00000084315
NCBI entrez gene - 555344     See in Manteia.
RefSeq - NM_001128331
RefSeq - XM_009294213
RefSeq Peptide - NP_001121803
swissprot - A3KQK4
ZFIN ID - ZDB-GENE-060503-810
Ensembl - ENSDARG00000062278
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5F3G7ENSGALG00000009752Gallus gallus
 Q9NS00ENSG00000106392Homo sapiens
 Q9JJ06ENSMUSG00000042460Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
C1GALT1 (1 of many) / core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 / Q9NS00* / C1GALT1*ENSDARG0000009909863
c1galt1b / core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1bENSDARG0000005556160
c1galt1a / core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1aENSDARG0000005558560
c1galt1c1 / C1GALT1-specific chaperone 1 / P0DN25* / Q96EU7* / Q9JMG2* / C1GALT1C1L* / C1GALT1-specific chaperone 1 like*ENSDARG0000003633524
b3glcta / beta 3-glucosyltransferase a / Q8BHT6* / Q6Y288* / B3GLCT* / beta 3-glucosyltransferase* / Beta-1,3-glucosyltransferase *ENSDARG0000007391721
b3glctb / beta 3-glucosyltransferase b / Q8BHT6* / Q6Y288* / B3GLCT* / beta 3-glucosyltransferase* / Beta-1,3-glucosyltransferase *ENSDARG0000007774020


Protein motifs (from Interpro)
Interpro ID Name
 IPR003378  Fringe-like
 IPR026842  Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016266 O-glycan processing IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016263 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000036335 c1galt1c1 / C1GALT1-specific chaperone 1 / P0DN25* / Q96EU7* / Q9JMG2* / C1GALT1C1L* / C1GALT1-specific chaperone 1 like*  / complex






 

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