ENSDARG00000055642


Danio rerio

Features
Gene ID: ENSDARG00000055642
  
Biological name :si:ch211-217a12.1
  
Synonyms : si:ch211-217a12.1
  
Possible biological names infered from orthology : glutamic--pyruvic transaminase / glutamic pyruvic transaminase, soluble / GPT / P24298 / Q8QZR5
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 14079097
Gene end: 14130716
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000134476
Ensembl peptide - ENSDARP00000148522
NCBI entrez gene - 100148522     See in Manteia.
RefSeq - XM_001919861
swissprot - A0A0R4IKG8
ZFIN ID - ZDB-GENE-121214-95
Ensembl - ENSDARG00000055642
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GPTENSG00000167701Homo sapiens
 GptENSMUSG00000022546Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gpt2l / glutamic pyruvate transaminase (alanine aminotransferase) 2, like / GPT* / P24298* / Q8QZR5* / glutamic--pyruvic transaminase* / glutamic pyruvic transaminase, soluble*ENSDARG0000001954179
gpt2 / glutamic pyruvate transaminase (alanine aminotransferase) 2 / Q8BGT5* / Q8TD30* / glutamic--pyruvic transaminase 2*ENSDARG0000001219969


Protein motifs (from Interpro)
Interpro ID Name
 IPR004839  Aminotransferase, class I/classII
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015422  Pyridoxal phosphate-dependent transferase domain 1
 IPR015424  Pyridoxal phosphate-dependent transferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009058 biosynthetic process IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IEA


Pathways (from Reactome)
Pathway description
Amino acid synthesis and interconversion (transamination)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000055642 si:ch211-217a12.1 / GPT* / P24298* / Q8QZR5* / glutamic--pyruvic transaminase* / glutamic pyruvic transaminase, soluble*  / complex






 

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contact: otassy@igbmc.fr