ENSDARG00000055754
Danio rerio | |
Features
| Gene ID: | ENSDARG00000055754 | | | | | Biological name : | smc1a | | | | | Synonyms : | smc1a / structural maintenance of chromosomes 1A | | | | | Possible biological names infered from orthology : | Q14683 / Q9CU62 | | | | | Species: | Danio rerio | | | | | Chr. number: | 23 | | Strand: | 1 | | Band: | | | Gene start: | 28693278 | | Gene end: | 28713982 | | | | | Corresponding Affymetrix probe sets: | | | | | | Cross references: | Ensembl peptide - ENSDARP00000072610
NCBI entrez gene - 559665
See in Manteia.
RefSeq - NM_001161631
RefSeq Peptide - NP_001155103
swissprot - E7F0X6
ZFIN ID - ZDB-GENE-090506-9
Ensembl - ENSDARG00000055754
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
| smc1al / structural maintenance of chromosomes 1A, like / SMC1A* / Q9CU62* / Q14683* / structural maintenance of chromosomes 1A* | ENSDARG00000058203 | 94 | | smc1b / structural maintenance of chromosomes 1B / Q8NDV3* / Q920F6* | ENSDARG00000014402 | 48 |
Protein motifs (from Interpro)
| IPR003395 | RecF/RecN/SMC, N-terminal | | IPR010935 | SMCs flexible hinge | | IPR024704 | Structural maintenance of chromosomes protein | | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | | IPR029683 | Structural maintenance of chromosomes protein 1A, metazoan |
Gene Ontology (GO)
Pathways (from Reactome)
Phenotype (from MGI, Zfin or HPO)
| ZFA:0001094 | whole organism | whole organism decreased amount , abnormal
whole organism dead , abnormal |
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| | ZFA:0001114 | head | head decreased size , abnormal |
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| | ZFA:0001117 | post-vent region | post-vent region bent , abnormal |
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| | ZFA:0001135 | neural tube | neural tube apoptotic process increased occurrence , abnormal |
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Interacting proteins (from Reactome)
No match
0 s.
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