ENSDARG00000056244


Danio rerio

Features
Gene ID: ENSDARG00000056244
  
Biological name :zgc:171740
  
Synonyms : zgc:171740
  
Possible biological names infered from orthology : AC004223.3 / E3 ubiquitin-protein ligase rififylin / Q6ZQM0 / Q8WZ73 / RFFL / ring finger and FYVE like domain containing E3 ubiquitin protein ligase
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 25054420
Gene end: 25062590
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000065131
Ensembl peptide - ENSDARP00000152109
NCBI entrez gene - 795694     See in Manteia.
RefSeq - NM_001109726
RefSeq Peptide - NP_001103196
swissprot - F1QKD6
ZFIN ID - ZDB-GENE-071004-29
Ensembl - ENSDARG00000056244
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RFFLENSGALG00000002225Gallus gallus
 AC004223.3ENSG00000267618Homo sapiens
 RFFLENSG00000092871Homo sapiens
 RfflENSMUSG00000020696Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rffl / ring finger and FYVE-like domain containing E3 ubiquitin protein ligase / Q6ZQM0* / Q8WZ73* / AC004223.3* / E3 ubiquitin-protein ligase rififylin *ENSDARG0000004283357
rnf34a / ring finger protein 34a / RNF34* / Q969K3* / ring finger protein 34*ENSDARG0000003830044
rnf34b / ring finger protein 34b / RNF34* / Q969K3* / ring finger protein 34*ENSDARG0000005403643


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR003034  SAP domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
Regulation of TP53 Degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr