ENSDARG00000056394


Danio rerio

Features
Gene ID: ENSDARG00000056394
  
Biological name :TOM1L2
  
Synonyms : Danio rerio target of myb1 like 2 membrane trafficking protein (tom1l2), mRNA. / TOM1L2
  
Possible biological names infered from orthology : Q5SRX1 / Q6ZVM7 / target of myb1 like 2 membrane trafficking protein / TOM1-like protein 2
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 62091298
Gene end: 62125701
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000088115
NCBI entrez gene - 100535615     See in Manteia.
RefSeq - NM_001351677
RefSeq - XM_009299895
RefSeq Peptide - NP_001338606
swissprot - E7FC90
Ensembl - ENSDARG00000056394
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TOM1L2ENSGALG00000004902Gallus gallus
 Q6ZVM7ENSG00000175662Homo sapiens
 Q5SRX1ENSMUSG00000000538Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tom1l2 / target of myb1 like 2 membrane trafficking protein / Q5SRX1* / Q6ZVM7* / TOM1-like protein 2 *ENSDARG0000000921769
tom1 / target of myb1 membrane trafficking protein / O60784* / O88746* / target of myb1 trafficking protein*ENSDARG0000010458141
GGA3 (1 of many) / si:ch73-157i16.3 / GGA3* / Q9NZ52* / Q8BMI3* / ADP-ribosylation factor-binding protein GGA3 * / golgi associated, gamma adaptin ear containing, ARF binding protein 3*ENSDARG0000009887121
gga3 / ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 / Q8BMI3* / Q9NZ52* / ADP-ribosylation factor-binding protein GGA3 * / golgi associated, gamma adaptin ear cont...ENSDARG0000010366719
gga1 / golgi-associated, gamma adaptin ear containing, ARF binding protein 1 / Q8R0H9* / Q9UJY5* / ADP-ribosylation factor-binding protein GGA1 *ENSDARG0000003853718


Protein motifs (from Interpro)
Interpro ID Name
 IPR002014  VHS domain
 IPR004152  GAT domain
 IPR008942  ENTH/VHS
 IPR014645  Target of Myb protein 1
 IPR027429  Target of Myb1-like 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005622 intracellular IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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