ENSDARG00000103667


Danio rerio

Features
Gene ID: ENSDARG00000103667
  
Biological name :gga3
  
Synonyms : gga3 / ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3
  
Possible biological names infered from orthology : ADP-ribosylation factor-binding protein GGA3 / golgi associated, gamma adaptin ear containing, ARF binding protein 3 / Q8BMI3 / Q9NZ52
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 19315715
Gene end: 19333947
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000131475
swissprot - A0A0R4IET1
ZFIN ID - ZDB-GENE-041111-218
Ensembl - ENSDARG00000103667
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GGA3ENSGALG00000007992Gallus gallus
 GGA3ENSG00000125447Homo sapiens
 Gga3ENSMUSG00000020740Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GGA3 (1 of many) / si:ch73-157i16.3 / GGA3* / Q9NZ52* / Q8BMI3* / ADP-ribosylation factor-binding protein GGA3 * / golgi associated, gamma adaptin ear containing, ARF binding protein 3*ENSDARG0000009887153
gga1 / golgi-associated, gamma adaptin ear containing, ARF binding protein 1 / Q8R0H9* / Q9UJY5* / ADP-ribosylation factor-binding protein GGA1 *ENSDARG0000003853743
tom1l2 / target of myb1 like 2 membrane trafficking protein / Q5SRX1* / Q6ZVM7* / TOM1-like protein 2 *ENSDARG0000000921715
TOM1L2 / Danio rerio target of myb1 like 2 membrane trafficking protein (tom1l2), mRNA. / Q6ZVM7* / target of myb1 like 2 membrane trafficking protein*ENSDARG0000005639413
tom1 / target of myb1 membrane trafficking protein / O60784* / O88746* / target of myb1 trafficking protein*ENSDARG0000010458113


Protein motifs (from Interpro)
Interpro ID Name
 IPR002014  VHS domain
 IPR004152  GAT domain
 IPR008152  Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
 IPR008153  Gamma-adaptin ear (GAE) domain
 IPR008942  ENTH/VHS
 IPR013041  Clathrin adaptor, appendage, Ig-like subdomain superfamily
 IPR027422  ADP-ribosylation factor-binding protein GGA3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005802 trans-Golgi network IEA
 cellular_componentGO:0030131 clathrin adaptor complex IEA
 molecular_functionGO:0030306 ADP-ribosylation factor binding IEA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs
MET receptor recycling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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