ENSDARG00000057007


Danio rerio

Features
Gene ID: ENSDARG00000057007
  
Biological name :ctbp1
  
Synonyms : ctbp1 / C-terminal binding protein 1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 21820034
Gene end: 21846181
  
Corresponding Affymetrix probe sets: Dr.10711.1.S1_at (Zebrafish Array)   Dr.10711.1.S2_at (Zebrafish Array)   Dr.10711.1.S3_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000112747
Ensembl peptide - ENSDARP00000107990
NCBI entrez gene - 65229     See in Manteia.
RefSeq - XM_005173133
swissprot - Q9DEG7
swissprot - E9QEQ4
ZFIN ID - ZDB-GENE-010130-1
Ensembl - ENSDARG00000057007
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CTBPLENSGALG00000007642Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:136929 / CTBP1* / O88712* / Q13363* / C-terminal binding protein 1*ENSDARG0000001921378
ctbp2a / C-terminal binding protein 2a / CTBP2* / P56545* / P56546* / C-terminal binding protein 2*ENSDARG0000004406273
phgdh / phosphoglycerate dehydrogenase / O43175* / Q61753* / D-3-phosphoglycerate dehydrogenase *ENSDARG0000000187324


Protein motifs (from Interpro)
Interpro ID Name
 IPR006139  D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
 IPR006140  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain
 IPR016040  NAD(P)-binding domain
 IPR029752  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1
 IPR029753  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0048384 retinoic acid receptor signaling pathway IGI
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:1903507 negative regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0003714 transcription corepressor activity IBA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
 molecular_functionGO:0016618 hydroxypyruvate reductase activity IBA
 molecular_functionGO:0030267 glyoxylate reductase (NADP) activity IBA
 molecular_functionGO:0042803 protein homodimerization activity IBA
 molecular_functionGO:0051287 NAD binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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