ENSDARG00000057062


Danio rerio

Features
Gene ID: ENSDARG00000057062
  
Biological name :si:dkey-157g16.6
  
Synonyms : si:dkey-157g16.6
  
Possible biological names infered from orthology : A6NMB9 / fidgetin like 2 / FIGNL2
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 27134942
Gene end: 27235654
  
Corresponding Affymetrix probe sets: Dr.18263.1.S1_at (Zebrafish Array)   Dr.4405.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000114769
Ensembl peptide - ENSDARP00000117734
NCBI entrez gene - 561837     See in Manteia.
swissprot - E9QDR5
swissprot - E9QEA3
ZFIN ID - ZDB-GENE-090313-189
Ensembl - ENSDARG00000057062
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FIGNL2ENSGALG00000033339Gallus gallus
 A6NMB9ENSG00000261308Homo sapiens
 Fignl2ENSMUSG00000095440Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fign / fidgetin / Q5HY92* / fidgetin, microtubule severing factor*ENSDARG0000000866254
fignl1 / fidgetin-like 1 / Q6PIW4* / Q8BPY9* / Fidgetin-like protein 1 *ENSDARG0000001642724
zgc:153738ENSDARG0000006923013
spast / Q6NW58 / spastin / Q9QYY8* / Q9UBP0*ENSDARG000000249339
iqca1 / IQ motif containing with AAA domain 1 / Iqca* / Q86XH1* / Q9CUL5* / IQ and AAA domain-containing protein 1 *ENSDARG000000572769


Protein motifs (from Interpro)
Interpro ID Name
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010569 regulation of double-strand break repair via homologous recombination IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr