ENSDARG00000057439


Danio rerio

Features
Gene ID: ENSDARG00000057439
  
Biological name :phf1
  
Synonyms : PHD finger protein 1 / phf1
  
Possible biological names infered from orthology : O43189 / Q9Z1B8
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 45424907
Gene end: 45443805
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000114106
Ensembl peptide - ENSDARP00000132724
swissprot - A0A0R4IFV8
swissprot - E9QC54
ZFIN ID - ZDB-GENE-100922-277
Ensembl - ENSDARG00000057439
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PHF1ENSG00000112511Homo sapiens
 Phf1ENSMUSG00000024193Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mtf2 / metal response element binding transcription factor 2 / Q02395* / Q9Y483*ENSDARG0000000559052
phf19 / PHD finger protein 19 / Q5T6S3* / Q9CXG9*ENSDARG0000007805046


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR002999  Tudor domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger
 IPR031202  PHD finger protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0031060 regulation of histone methylation IEA
 molecular_functionGO:0035064 methylated histone binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
PRC2 methylates histones and DNA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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