ENSDARG00000057598


Danio rerio

Features
Gene ID: ENSDARG00000057598
  
Biological name :s100b
  
Synonyms : s100b / S100 calcium binding protein, beta (neural)
  
Possible biological names infered from orthology : P04271 / P50114 / S100 calcium binding protein B / S100 protein, beta polypeptide, neural
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 13846130
Gene end: 13857729
  
Corresponding Affymetrix probe sets: Dr.14787.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000074756
Ensembl peptide - ENSDARP00000144602
NCBI entrez gene - 436825     See in Manteia.
RefSeq - XM_009296202
RefSeq - NM_001002552
RefSeq Peptide - NP_001002552
swissprot - Q6DGT8
ZFIN ID - ZDB-GENE-040718-290
Ensembl - ENSDARG00000057598
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 S100BENSGALG00000006217Gallus gallus
 S100BENSG00000160307Homo sapiens
 S100bENSMUSG00000033208Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
s100a1 / S100 calcium binding protein A1ENSDARG0000001554348
s100t / S100 calcium binding protein T / P07091* / P14069* / P26447* / P29034* / P33763* / P33764* / P62818* / P63084* / S100A2* / S100A3* / S100A4* / S100A5* / S100A6* / P06703* / Gm42674*...ENSDARG0000005558944
s100z / S100 calcium binding protein Z / Q8WXG8*ENSDARG0000003872943
icn2 / ictacalcin 2 / P14069* / P26447* / P29034* / P33763* / P33764* / P62818* / P63084* / P06703* / P07091* / S100A2* / S100A3* / S100A4* / S100A5* / S100A6* / Gm42674* / S100 calcium bin...ENSDARG0000005551442
icn / ictacalcin / P14069* / P26447* / P29034* / P33763* / P33764* / P62818* / P63084* / P06703* / P07091* / S100A2* / S100A3* / S100A4* / S100A5* / S100A6* / Gm42674* / S100 calcium bindin...ENSDARG0000000997840
s100s / S100 calcium binding protein S / P07091* / P14069* / P26447* / P29034* / P33763* / P33764* / P62818* / P63084* / S100A2* / S100A3* / S100A4* / S100A5* / S100A6* / P06703* / Gm42674*...ENSDARG0000003677338
s100a10b / S100 calcium binding protein A10b / P60903* / P50543* / P08207* / P31949* / S100A10* / S100A11* / Protein S100-A11 * / S100 calcium binding protein A10* / S100 calcium binding pr...ENSDARG0000002525437
s100a10a / S100 calcium binding protein A10a / P60903* / P50543* / P08207* / P31949* / S100A10* / S100A11* / Protein S100-A11 * / S100 calcium binding protein A10* / S100 calcium binding pr...ENSDARG0000003742534


Protein motifs (from Interpro)
Interpro ID Name
 IPR001751  S100/Calbindin-D9k, conserved site
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR013787  S100/CaBP-9k-type, calcium binding, subdomain
 IPR028481  Protein S100-B


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Advanced glycosylation endproduct receptor signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000056090 capza1b / capping protein (actin filament) muscle Z-line, alpha 1b / P52907* / CAPZA1* / 4933400A11Rik* / RIKEN cDNA 4933400A11 gene* / capping actin protein of muscle Z-line alpha subunit 1*  / complex / reaction
 ENSDARG00000057598 s100b / S100 calcium binding protein, beta (neural) / P50114* / P04271* / S100 calcium binding protein B* / S100 protein, beta polypeptide, neural*  / complex






 

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