ENSDARG00000057719


Danio rerio

Features
Gene ID: ENSDARG00000057719
  
Biological name :atl2
  
Synonyms : atl2 / atlastin GTPase 2
  
Possible biological names infered from orthology : Mus musculus atlastin GTPase 2 (Atl2), transcript variant 5, mRNA. / Q6PA06 / Q8NHH9
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 8281223
Gene end: 8304605
  
Corresponding Affymetrix probe sets: Dr.4432.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000074909
NCBI entrez gene - 323665     See in Manteia.
RefSeq - NM_001110022
RefSeq Peptide - NP_001103492
swissprot - F6NJS4
ZFIN ID - ZDB-GENE-030131-6505
Ensembl - ENSDARG00000057719
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATL2ENSGALG00000037289Gallus gallus
 ATL2ENSG00000119787Homo sapiens
 Atl2ENSMUSG00000059811Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atl1 / atlastin GTPase 1 / Q8BH66* / Q8WXF7* / Atlastin-1 *ENSDARG0000006048157
atl3 / atlastin 3 / Q6DD88* / Q91YH5* / atlastin GTPase 3*ENSDARG0000000427051


Protein motifs (from Interpro)
Interpro ID Name
 IPR003191  Guanylate-binding protein/Atlastin, C-terminal
 IPR015894  Guanylate-binding protein, N-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030386  GB1/RHD3-type guanine nucleotide-binding (G) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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