ENSDARG00000058102


Danio rerio

Features
Gene ID: ENSDARG00000058102
  
Biological name :sardh
  
Synonyms : sarcosine dehydrogenase / sardh
  
Possible biological names infered from orthology : Q99LB7 / Q9UL12
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 10386435
Gene end: 10564968
  
Corresponding Affymetrix probe sets: Dr.26444.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000148230
Ensembl peptide - ENSDARP00000075348
Ensembl peptide - ENSDARP00000143816
Ensembl peptide - ENSDARP00000154120
NCBI entrez gene - 394103     See in Manteia.
swissprot - F1Q5K3
ZFIN ID - ZDB-GENE-040426-996
Ensembl - ENSDARG00000058102
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SARDHENSGALG00000002855Gallus gallus
 SARDHENSG00000123453Homo sapiens
 SardhENSMUSG00000009614Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PDPR / si:cabz01113374.3 / Q8NCN5* / pyruvate dehydrogenase phosphatase regulatory subunit*ENSDARG0000010328830
dmgdh / dimethylglycine dehydrogenase / Q9UI17*ENSDARG0000002570328
amt / aminomethyltransferase / P48728* / Q8CFA2* / Aminomethyltransferase, mitochondrial *ENSDARG0000001086210


Protein motifs (from Interpro)
Interpro ID Name
 IPR006076  FAD dependent oxidoreductase
 IPR006222  Aminomethyltransferase, folate-binding domain
 IPR013977  Glycine cleavage T-protein, C-terminal barrel domain
 IPR023753  FAD/NAD(P)-binding domain
 IPR029043  Glycine cleavage T-protein/YgfZ, C-terminal
 IPR032503  FAD dependent oxidoreductase, central domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
Choline catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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