ENSDARG00000103288


Danio rerio

Features
Gene ID: ENSDARG00000103288
  
Biological name :PDPR
  
Synonyms : PDPR / si:cabz01113374.3
  
Possible biological names infered from orthology : pyruvate dehydrogenase phosphatase regulatory subunit / Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial / Q7TSQ8 / Q8NCN5
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 50839633
Gene end: 50845804
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000139817
Ensembl peptide - ENSDARP00000148594
NCBI entrez gene - 100330789     See in Manteia.
swissprot - E7FC79
ZFIN ID - ZDB-GENE-161017-151
Ensembl - ENSDARG00000103288
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PDPRENSGALG00000002690Gallus gallus
 PDPRENSG00000090857Homo sapiens
 PdprENSMUSG00000033624Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sardh / sarcosine dehydrogenase / Q99LB7* / Q9UL12*ENSDARG0000005810232
dmgdh / dimethylglycine dehydrogenase / Q9UI17*ENSDARG0000002570326
amt / aminomethyltransferase / P48728* / Q8CFA2* / Aminomethyltransferase, mitochondrial *ENSDARG000000108629


Protein motifs (from Interpro)
Interpro ID Name
 IPR006076  FAD dependent oxidoreductase
 IPR006222  Aminomethyltransferase, folate-binding domain
 IPR013977  Glycine cleavage T-protein, C-terminal barrel domain
 IPR023753  FAD/NAD(P)-binding domain
 IPR029043  Glycine cleavage T-protein/YgfZ, C-terminal
 IPR032503  FAD dependent oxidoreductase, central domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005759 mitochondrial matrix IBA
 molecular_functionGO:0016491 oxidoreductase activity IBA


Pathways (from Reactome)
Pathway description
Regulation of pyruvate dehydrogenase (PDH) complex


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000076308 pdp1 / pyruvate dehyrogenase phosphatase catalytic subunit 1 / Q3UV70* / Q9P0J1*  / complex






 

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