ENSDARG00000060631


Danio rerio

Features
Gene ID: ENSDARG00000060631
  
Biological name :si:ch211-182d3.1
  
Synonyms : A5PF44 / si:ch211-182d3.1
  
Possible biological names infered from orthology : GARNL3 / GTPase activating Rap/RanGAP domain like 3 / Mus musculus GTPase activating RANGAP domain-like 3 (Garnl3), transcript variant 2, mRNA. / Q3V0G7 / Q5VVW2
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 33356425
Gene end: 33460959
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000080071
NCBI entrez gene - 560594     See in Manteia.
RefSeq - NM_001128527
RefSeq Peptide - NP_001121999
swissprot - A5PF44
ZFIN ID - ZDB-GENE-060526-61
Ensembl - ENSDARG00000060631
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GARNL3ENSGALG00000000847Gallus gallus
 GARNL3ENSG00000136895Homo sapiens
 Garnl3ENSMUSG00000038860Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sipa1l1 / signal-induced proliferation-associated 1 like 1 / O43166* / Q8C0T5* / Signal-induced proliferation-associated 1-like protein 1 *ENSDARG0000002013423
sipa1l3 / signal-induced proliferation-associated 1 like 3 / G3X9J0* / O60292*ENSDARG0000006169923
sipa1l2 / signal-induced proliferation-associated 1 like 2 / Q80TE4* / Q9P2F8* / Mus musculus signal-induced proliferation-associated 1 like 2 (Sipa1l2), transcript variant 2, mRNA.*ENSDARG0000006164022
zmp:0000001168 / SIPA1* / Q96FS4* / signal-induced proliferation-associated 1*ENSDARG0000007669718
rap1gap / RAP1 GTPase activating protein / A2ALS5* / P47736* / Mus musculus Rap1 GTPase-activating protein (Rap1gap), transcript variant 5, mRNA.*ENSDARG0000005655417
rap1gap2b / RAP1 GTPase activating protein 2b / Q5SVL6* / Q684P5* / RAP1GAP2* / RAP1 GTPase activating protein 2*ENSDARG0000007422217
si:dkey-166d12.2 / P47736* / RAP1GAP* / RAP1 GTPase activating protein*ENSDARG0000005327216
rap1gap2a / RAP1 GTPase activating protein 2a / Q5SVL6* / Q684P5* / RAP1GAP2* / RAP1 GTPase activating protein 2*ENSDARG0000006155113
si:ch1073-90m23.1ENSDARG0000009157313
ralgapa1 / Ral GTPase activating protein, alpha subunit 1 (catalytic) / Q6GYQ0* / Q6GYP7* / Ral GTPase activating protein, alpha subunit 1* / Ral GTPase activating protein catalytic alpha subunit 1*ENSDARG0000007688911
ralgapa2 / Ral GTPase activating protein, alpha subunit 2 (catalytic) / Q2PPJ7* / A3KGS3* / Ral GTPase-activating protein subunit alpha-2 * / Ral GTPase activating protein catalytic alpha subunit 2*ENSDARG000000058619
tsc2 / TSC complex subunit 2ENSDARG000001031257
CABZ01067150.1ENSDARG000001161221


Protein motifs (from Interpro)
Interpro ID Name
 IPR000331  Rap GTPase activating protein domain
 IPR001180  Citron homology (CNH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0051056 regulation of small GTPase mediated signal transduction IEA
 molecular_functionGO:0005096 GTPase activator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr