ENSGALG00000000847


Gallus gallus

Features
Gene ID: ENSGALG00000000847
  
Biological name :GARNL3
  
Synonyms : GARNL3 / GTPase-activating Rap/Ran-GAP domain-like protein 3
  
Possible biological names infered from orthology : GTPase activating Rap/RanGAP domain like 3 / Mus musculus GTPase activating RANGAP domain-like 3 (Garnl3), transcript variant 2, mRNA. / Q3V0G7 / Q5VVW2
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 10901976
Gene end: 10937573
  
Corresponding Affymetrix probe sets: Gga.13354.1.S1_at (Chicken Array)   Gga.13354.2.S1_at (Chicken Array)   Gga.13354.2.S1_a_at (Chicken Array)   Gga.13354.3.S1_a_at (Chicken Array)   Gga.6042.2.S1_s_at (Chicken Array)   GgaAffx.12404.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000037841
Ensembl peptide - ENSGALP00000062052
Ensembl peptide - ENSGALP00000001241
NCBI entrez gene - 417087     See in Manteia.
RefSeq - XM_015279378
RefSeq - XM_015279374
RefSeq - XM_015279375
RefSeq - XM_015279376
RefSeq - XM_015279377
RefSeq - NM_001030676
RefSeq - XM_015279363
RefSeq - XM_015279364
RefSeq - XM_015279365
RefSeq - XM_015279366
RefSeq - XM_015279367
RefSeq - XM_015279368
RefSeq - XM_015279369
RefSeq - XM_015279371
RefSeq - XM_015279372
RefSeq - XM_015279373
RefSeq Peptide - NP_001025847
swissprot - E1C7U1
swissprot - F1P076
swissprot - A0A1L1RTB8
Ensembl - ENSGALG00000000847
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A5PF44ENSDARG00000060631Danio rerio
 GARNL3ENSG00000136895Homo sapiens
 Garnl3ENSMUSG00000038860Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SIPA1L1 / O43166* / Q8C0T5* / signal induced proliferation associated 1 like 1* / Signal-induced proliferation-associated 1-like protein 1 *ENSGALG0000000938125
SIPA1L2 / signal induced proliferation associated 1 like 2 / Q80TE4* / Q9P2F8* / Mus musculus signal-induced proliferation-associated 1 like 2 (Sipa1l2), transcript variant 2, mRNA.*ENSGALG0000003750625
RAP1GAP2 / rap1 GTPase-activating protein 2 / Q5SVL6* / Q684P5*ENSGALG0000003388520
RAP1GAP1 / RAP1 GTPase activating protein / P47736* / A2ALS5* / RAP1GAP* / Mus musculus Rap1 GTPase-activating protein (Rap1gap), transcript variant 5, mRNA.*ENSGALG0000001470116
RALGAPA1 / ral GTPase-activating protein subunit alpha-1 isoform 3 / Q6GYQ0* / Q6GYP7* / Ral GTPase activating protein, alpha subunit 1* / Ral GTPase activating protein catalytic alpha subunit 1*ENSGALG0000001008812
TSC2 / TSC complex subunit 2 / P49815* / tuberous sclerosis 2*ENSGALG000000056469
A3KGS3* / Q2PPJ7* / RALGAPA2* / Ral GTPase-activating protein subunit alpha-2 * / Ral GTPase activating protein catalytic alpha subunit 2*ENSGALG000000447302
A3KGS3* / Q2PPJ7* / RALGAPA2* / Ral GTPase-activating protein subunit alpha-2 * / Ral GTPase activating protein catalytic alpha subunit 2*ENSGALG000000329641


Protein motifs (from Interpro)
Interpro ID Name
 IPR000331  Rap GTPase activating protein domain
 IPR001180  Citron homology (CNH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0051056 regulation of small GTPase mediated signal transduction IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0005096 GTPase activator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr