ENSDARG00000060688


Danio rerio

Features
Gene ID: ENSDARG00000060688
  
Biological name :trim69
  
Synonyms : trim69 / tripartite motif containing 69
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase TRIM69 / Q80X56 / Q86WT6
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 40836378
Gene end: 40851677
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000080227
NCBI entrez gene - 101883816     See in Manteia.
RefSeq - NM_001302246
RefSeq Peptide - NP_001289175
swissprot - E7F8P0
ZFIN ID - ZDB-GENE-030131-857
Ensembl - ENSDARG00000060688
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q86WT6ENSG00000185880Homo sapiens
 Q80X56ENSMUSG00000033368Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trim62 / tripartite motif containing 62 / Q80V85* / Q9BVG3* / E3 ubiquitin-protein ligase TRIM62 *ENSDARG0000006090126
trim35-12 / tripartite motif containing 35-12 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010126426
trim35-13 / tripartite motif containing 35-13 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000000397025
si:dkey-37m8.11 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000004023025
si:ch211-12p12.2 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010221925
trim35-28 / tripartite motif containing 35-28 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000002102124
trim35-3 / tripartite motif containing 35-3 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000005225524
trim47 / tripartite motif containing 47ENSDARG0000005667824
trim35-7 / tripartite motif containing 35-7 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000005895824
trim35-33 / tripartite motif containing 35-33 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000006083824
trim35-20 / tripartite motif containing 35-20 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000007084724
trim35-39 / tripartite motif containing 35-39 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000007124124
trim35-19 / tripartite motif containing 35-19 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000009963924
trim35-24 / tripartite motif containing 35-24 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000009968424
trim105 / tripartite motif containing 105ENSDARG0000009988524
si:ch211-175l6.2 / TRIM35 (1 of many) / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010072124
trim35-25 / tripartite motif containing 35-25 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010105524
trim35-21 / tripartite motif containing 35-21 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010230324
trim35-23 / tripartite motif containing 35-23 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010236824
CR394535.1 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010319324


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007420 brain development IMP
 biological_processGO:0042981 regulation of apoptotic process IMP
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain morphology , ameliorated
brain amount , ameliorated
brain apoptotic , abnormal
brain deformed , abnormal
brain decreased amount , abnormal
Show

 ZFA:0000029 hindbrain hindbrain decreased amount , abnormal
Show

 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary morphology , ameliorated
midbrain hindbrain boundary absent , abnormal
midbrain hindbrain boundary decreased amount , abnormal
Show

 ZFA:0000109 forebrain forebrain decreased amount , abnormal
Show

 ZFA:0001094 whole organism whole organism increased amount , abnormal
Show

 ZFA:0009019 neuronal stem cell neuronal stem cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr