ENSDARG00000061024


Danio rerio

Features
Gene ID: ENSDARG00000061024
  
Biological name :rabggta
  
Synonyms : Rab geranylgeranyltransferase, alpha subunit / rabggta
  
Possible biological names infered from orthology : Geranylgeranyl transferase type-2 subunit alpha / Q92696 / Q9JHK4
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 1702624
Gene end: 1726560
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124053
swissprot - F1QJ77
ZFIN ID - ZDB-GENE-060929-1042
Ensembl - ENSDARG00000061024
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q92696ENSG00000100949Homo sapiens
 Q9JHK4ENSMUSG00000040472Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR002088  Protein prenyltransferase, alpha subunit
 IPR009087  Rab geranylgeranyltransferase, alpha subunit, insert-domain
 IPR032675  Leucine-rich repeat domain superfamily
 IPR032955  Geranylgeranyl transferase type-2 subunit alpha


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0018342 protein prenylation IEA
 biological_processGO:0018344 protein geranylgeranylation IEA
 cellular_componentGO:0005968 Rab-protein geranylgeranyltransferase complex IEA
 molecular_functionGO:0004663 Rab geranylgeranyltransferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0008318 protein prenyltransferase activity IEA


Pathways (from Reactome)
Pathway description
TP53 regulates transcription of several additional cell death genes whose specific roles in p53-dependent apoptosis remain uncertain
RAB geranylgeranylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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