Manteia

ENSDARG00000061248

Danio rerio

Features

Gene ID:	ENSDARG00000061248

Biological name :	xylt1

Synonyms :	xylosyltransferase I / xylt1

Possible biological names infered from orthology :	Q86Y38 / xylosyltransferase 1

Species:	Danio rerio

Chr. number:	3
Strand:	-1
Band:
Gene start:	26418451
Gene end:	26524934

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000081552 NCBI entrez gene - 560951 See in Manteia. RefSeq - NM_001172397 RefSeq Peptide - NP_001165868 swissprot - F1R0Z0 ZFIN ID - ZDB-GENE-111017-2 Ensembl - ENSDARG00000061248

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
xylt2 / xylosyltransferase II / Q9H1B5* / xylosyltransferase 2*	ENSDARG00000059557	49
gcnt7 / glucosaminyl (N-acetyl) transferase family member 7 / Q3V3K7* / Q6ZNI0* / Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7 *	ENSDARG00000040608	10
Q71SG7 / gcnt4a / glucosaminyl (N-acetyl) transferase 4, core 2, a / GCNT4* / Q9P109* / E9Q649* / glucosaminyl (N-acetyl) transferase 4, core 2* / Beta-1,3-galactosyl-O-glycosyl-glycoprotei...	ENSDARG00000035198	9
si:dkeyp-87d8.8 / GCNT4* / Q9P109* / E9Q649* / glucosaminyl (N-acetyl) transferase 4, core 2* / Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 *	ENSDARG00000044755	9
gcnt4b / glucosaminyl (N-acetyl) transferase 4, core 2, b / GCNT4* / Q9P109* / E9Q649* / glucosaminyl (N-acetyl) transferase 4, core 2* / Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...	ENSDARG00000077550	9
gcnt3 / glucosaminyl (N-acetyl) transferase 3, mucin type / O95395* / Q5JCT0* / Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 *	ENSDARG00000060471	8

Protein motifs (from Interpro)

Interpro ID	Name
IPR003406	Glycosyl transferase, family 14
IPR024448	Xylosyltransferase

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006024	glycosaminoglycan biosynthetic process	IEA
biological_process	GO:0030166	proteoglycan biosynthetic process	IMP
biological_process	GO:0048701	embryonic cranial skeleton morphogenesis	IMP
cellular_component	GO:0016020	membrane	IEA
molecular_function	GO:0008375	acetylglucosaminyltransferase activity	IEA
molecular_function	GO:0030158	protein xylosyltransferase activity	IEA

Pathways (from Reactome)

Pathway description

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
ZFA:0000737	cranium	cranium decreased size , abnormal cranium extracellular matrix decreased volume , abnormal cranium perichondral bone hyperplastic , abnormal	Show
ZFA:0001216	splanchnocranium	splanchnocranium structure , abnormal	Show
ZFA:0001400	ceratohyal cartilage	ceratohyal cartilage morphology , abnormal ceratohyal cartilage decreased size , abnormal ceratohyal cartilage hypoplastic , abnormal ceratohyal cartilage aplastic , abnormal	Show
ZFA:0001424	chondrocranium	chondrocranium structure , abnormal	Show
ZFA:0001458	cranial cartilage	cranial cartilage hypoplastic , abnormal	Show
ZFA:0001630	perichondral bone	perichondral bone has extra parts of type osteoblast , abnormal perichondral bone hyperplastic , abnormal perichondral bone aplastic , abnormal	Show
ZFA:0009313	hypertrophic chondrocyte	hypertrophic chondrocyte increased amount , abnormal	Show

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2025 contact: otassy@igbmc.fr