ENSDARG00000035198


Danio rerio

Features
Gene ID: ENSDARG00000035198
  
Biological name :gcnt4a
  
Synonyms : gcnt4a / glucosaminyl (N-acetyl) transferase 4, core 2, a / Q71SG7
  
Possible biological names infered from orthology : Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 / E9Q649 / GCNT4 / glucosaminyl (N-acetyl) transferase 4, core 2 / Q9P109
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 51026563
Gene end: 51030105
  
Corresponding Affymetrix probe sets: Dr.21590.1.A1_at (Zebrafish Array)   NM_201583_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000050987
NCBI entrez gene - 324510     See in Manteia.
RefSeq - NM_201583
RefSeq Peptide - NP_963877
swissprot - Q71SG7
ZFIN ID - ZDB-GENE-030131-3231
Ensembl - ENSDARG00000035198
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GCNT4ENSGALG00000014944Gallus gallus
 GCNT4ENSG00000176928Homo sapiens
 Gcnt4ENSMUSG00000091387Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkeyp-87d8.8 / GCNT4* / Q9P109* / E9Q649* / glucosaminyl (N-acetyl) transferase 4, core 2* / Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 *ENSDARG0000004475557
gcnt4b / glucosaminyl (N-acetyl) transferase 4, core 2, b / GCNT4* / Q9P109* / E9Q649* / glucosaminyl (N-acetyl) transferase 4, core 2* / Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,...ENSDARG0000007755054
gcnt3 / glucosaminyl (N-acetyl) transferase 3, mucin type / O95395* / Q5JCT0* / Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 *ENSDARG0000006047140
gcnt7 / glucosaminyl (N-acetyl) transferase family member 7 / Q3V3K7* / Q6ZNI0* / Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7 *ENSDARG0000004060831
xylt1 / xylosyltransferase I / Q86Y38* / xylosyltransferase 1*ENSDARG0000006124820
xylt2 / xylosyltransferase II / Q9H1B5* / xylosyltransferase 2*ENSDARG0000005955719


Protein motifs (from Interpro)
Interpro ID Name
 IPR003406  Glycosyl transferase, family 14


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003829 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity IEA
 molecular_functionGO:0008375 acetylglucosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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