ENSDARG00000062147


Danio rerio

Features
Gene ID: ENSDARG00000062147
  
Biological name :otc
  
Synonyms : ornithine carbamoyltransferase / otc
  
Possible biological names infered from orthology : Ornithine carbamoyltransferase, mitochondrial / P00480 / P11725
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 30268040
Gene end: 30274412
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000083959
NCBI entrez gene - 794667     See in Manteia.
swissprot - E9QHD9
ZFIN ID - ZDB-GENE-070912-422
Ensembl - ENSDARG00000062147
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OTCENSGALG00000016254Gallus gallus
 OTCENSG00000036473Homo sapiens
 OtcENSMUSG00000031173Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002292  Ornithine/putrescine carbamoyltransferase
 IPR006130  Aspartate/ornithine carbamoyltransferase
 IPR006131  Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
 IPR006132  Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000050 urea cycle IBA
 biological_processGO:0006520 cellular amino acid metabolic process IEA
 biological_processGO:0042450 arginine biosynthetic process via ornithine IBA
 cellular_componentGO:0005739 mitochondrion IBA
 molecular_functionGO:0004585 ornithine carbamoyltransferase activity IBA
 molecular_functionGO:0016597 amino acid binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016743 carboxyl- or carbamoyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Mitochondrial protein import
Urea cycle


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000062147 otc / ornithine carbamoyltransferase / P00480* / P11725* / Ornithine carbamoyltransferase, mitochondrial *  / complex






 

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