ENSDARG00000062237


Danio rerio

Features
Gene ID: ENSDARG00000062237
  
Biological name :nfs1
  
Synonyms : nfs1 / NFS1 cysteine desulfurase
  
Possible biological names infered from orthology : AL109827.1 / Cysteine desulfurase, mitochondrial / Q9Y697 / Q9Z1J3
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 24348425
Gene end: 24356093
  
Corresponding Affymetrix probe sets: Dr.26514.1.A1_at (Zebrafish Array)   NM_001044993_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000084180
NCBI entrez gene - 562714     See in Manteia.
RefSeq - NM_001044993
RefSeq Peptide - NP_001038458
swissprot - Q1LYQ9
ZFIN ID - ZDB-GENE-060405-1
Ensembl - ENSDARG00000062237
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NFS1ENSGALG00000001568Gallus gallus
 AL109827.1ENSG00000272897Homo sapiens
 NFS1ENSG00000244005Homo sapiens
 Nfs1ENSMUSG00000027618Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
scly / selenocysteine lyase / Q96I15*ENSDARG0000007381329


Protein motifs (from Interpro)
Interpro ID Name
 IPR000192  Aminotransferase class V domain
 IPR010240  Cysteine desulfurase IscS
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015422  Pyridoxal phosphate-dependent transferase domain 1
 IPR015424  Pyridoxal phosphate-dependent transferase
 IPR016454  Cysteine desulfurase
 IPR020578  Aminotransferase class-V, pyridoxal-phosphate binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0044571 [2Fe-2S] cluster assembly IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IEA
 molecular_functionGO:0031071 cysteine desulfurase activity IEA


Pathways (from Reactome)
Pathway description
Mitochondrial iron-sulfur cluster biogenesis
Molybdenum cofactor biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000026582 iscub / iron-sulfur cluster assembly enzyme b / ISCU* / Q9D7P6* / Q9H1K1* / iron-sulfur cluster assembly enzyme* / Iron-sulfur cluster assembly enzyme ISCU, mitochondrial *  / complex
 ENSDARG00000008239 mocs3 / molybdenum cofactor synthesis 3 / A2BDX3* / O95396* / Adenylyltransferase and sulfurtransferase MOCS3 Molybdopterin-synthase adenylyltransferase Molybdopterin-synthase sulfurtransferase*  / reaction
 ENSDARG00000062237 nfs1 / NFS1 cysteine desulfurase / Q9Y697* / Q9Z1J3* / AL109827.1* / Cysteine desulfurase, mitochondrial *  / complex
 ENSDARG00000078352 lyrm4 / B8JLQ0 / LYR motif containing 4 / Q8K215* / Q9HD34* / LYR motif-containing protein 4 *  / complex
 ENSDARG00000101110 LYRM4 / si:ch211-152c8.4 / Q8K215* / Q9HD34* / LYR motif containing 4* / LYR motif-containing protein 4 *  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr