ENSDARG00000062893


Danio rerio

Features
Gene ID: ENSDARG00000062893
  
Biological name :si:dkey-103i16.6
  
Synonyms : si:dkey-103i16.6
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 15271993
Gene end: 15289997
  
Corresponding Affymetrix probe sets: Dr.16811.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000090550
NCBI entrez gene - 557125     See in Manteia.
RefSeq - NM_001044708
RefSeq Peptide - NP_001038173
swissprot - F1QVT1
ZFIN ID - ZDB-GENE-061207-46
Ensembl - ENSDARG00000062893
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sirt3 / sirtuin 3 / Q8R104* / Q9NTG7*ENSDARG0000003581944
sirt2 / sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) / Q8VDQ8* / Q8IXJ6* / sirtuin 2* / NAD-dependent protein deacetylase sirtuin-2 *ENSDARG0000001148838


Protein motifs (from Interpro)
Interpro ID Name
 IPR003000  Sirtuin family
 IPR017328  Sirtuin, class I
 IPR026590  Sirtuin family, catalytic core domain
 IPR029035  DHS-like NAD/FAD-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016575 histone deacetylation IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0017136 NAD-dependent histone deacetylase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070403 NAD+ binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr