ENSDARG00000062977


Danio rerio
sterilealphamotifdomainsamd13pointedsuperfamilybiologicalprocesscellularcomponentmolecularfunction

Features
Gene ID: ENSDARG00000062977
  
Biological name :samd13
  
Synonyms : samd13 / sterile alpha motif domain containing 13
  
Possible biological names infered from orthology : D3YUG0 / Q5VXD3 / Sterile alpha motif domain-containing protein 13
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 8152872
Gene end: 8161149
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000123085
Ensembl peptide - ENSDARP00000138405
Ensembl peptide - ENSDARP00000086071
NCBI entrez gene - 767772     See in Manteia.
RefSeq - NM_001076739
RefSeq - XM_005172827
RefSeq - XM_009305815
RefSeq - NM_001168317
RefSeq Peptide - NP_001070207
RefSeq Peptide - NP_001161789
swissprot - Q08C88
ZFIN ID - ZDB-GENE-060929-676
Ensembl - ENSDARG00000062977
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SAMD13ENSGALG00000008835Gallus gallus
 Q5VXD3ENSG00000203943Homo sapiens
 D3YUG0ENSMUSG00000048652Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
samd1b / sterile alpha motif domain containing 1b / SAMD1* / D3YXK1* / Atherin * / sterile alpha motif domain containing 1*ENSDARG0000007906256
samd1a / sterile alpha motif domain containing 1a / SAMD1* / sterile alpha motif domain containing 1*ENSDARG0000010281055


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr