ENSDARG00000102810


Danio rerio

Features
Gene ID: ENSDARG00000102810
  
Biological name :samd1a
  
Synonyms : samd1a / sterile alpha motif domain containing 1a
  
Possible biological names infered from orthology : Atherin / D3YXK1 / SAMD1 / sterile alpha motif domain containing 1
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 49425793
Gene end: 49447949
  
Corresponding Affymetrix probe sets: Dr.15734.1.S1_at (Zebrafish Array)   Dr.15734.2.S1_at (Zebrafish Array)   Dr.15734.2.S1_a_at (Zebrafish Array)   Dr.15734.2.S1_x_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000131835
NCBI entrez gene - 768149     See in Manteia.
RefSeq - NM_001316989
RefSeq Peptide - NP_001303918
swissprot - Q08BI1
ZFIN ID - ZDB-GENE-061013-517
Ensembl - ENSDARG00000102810
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SAMD1ENSG00000141858Homo sapiens
 Samd1ENSMUSG00000079003Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
samd1b / sterile alpha motif domain containing 1b / SAMD1* / D3YXK1* / Atherin * / sterile alpha motif domain containing 1*ENSDARG0000007906235
samd13 / sterile alpha motif domain containing 13 / D3YUG0* / Q5VXD3* / Sterile alpha motif domain-containing protein 13 *ENSDARG0000006297714


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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