ENSMUSG00000079003


Mus musculus

Features
Gene ID: ENSMUSG00000079003
  
Biological name :Samd1
  
Synonyms : Atherin / D3YXK1 / Samd1
  
Possible biological names infered from orthology : sterile alpha motif domain containing 1
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: C2
Gene start: 83997672
Gene end: 84000409
  
Corresponding Affymetrix probe sets: 1434183_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000092853
Ensembl peptide - ENSMUSP00000148131
NCBI entrez gene - 666704     See in Manteia.
MGI - MGI:2142433
RefSeq - NM_001081415
RefSeq Peptide - NP_001074884
swissprot - D3YXK1
swissprot - A0A1B0GSZ3
Ensembl - ENSMUSG00000079003
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 samd1aENSDARG00000102810Danio rerio
 samd1bENSDARG00000079062Danio rerio
 SAMD1ENSG00000141858Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
D3YUG0 / Samd13 / Sterile alpha motif domain-containing protein 13 / Q5VXD3* / sterile alpha motif domain containing 13*ENSMUSG0000004865210


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr