ENSDARG00000062983


Danio rerio

Features
Gene ID: ENSDARG00000062983
  
Biological name :fbxo18
  
Synonyms : F-box protein, helicase, 18 / fbxo18
  
Possible biological names infered from orthology : Mus musculus F-box protein 18 (Fbxo18), transcript variant 5, mRNA. / Q8K2I9 / Q8NFZ0
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 9851810
Gene end: 9867843
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000149539
Ensembl peptide - ENSDARP00000157505
Ensembl peptide - ENSDARP00000086063
Ensembl peptide - ENSDARP00000118792
Ensembl peptide - ENSDARP00000144816
NCBI entrez gene - 567995     See in Manteia.
RefSeq - NM_001045149
RefSeq Peptide - NP_001038614
swissprot - E9QBZ9
swissprot - F6NLJ4
ZFIN ID - ZDB-GENE-041210-99
Ensembl - ENSDARG00000062983
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 F1ND48ENSGALG00000008162Gallus gallus
 FBXO18ENSG00000134452Homo sapiens
 Fbxo18ENSMUSG00000058594Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000212  DNA helicase, UvrD/REP type
 IPR001810  F-box domain
 IPR014017  UvrD-like DNA helicase, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032508 DNA duplex unwinding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0004003 ATP-dependent DNA helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr