ENSDARG00000063194


Danio rerio

Features
Gene ID: ENSDARG00000063194
  
Biological name :lin54
  
Synonyms : lin54 / lin-54 DREAM MuvB core complex component
  
Possible biological names infered from orthology : Mus musculus lin-54 homolog (C. elegans) (Lin54), transcript variant 3, mRNA. / Q571G4 / Q6MZP7
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 11324515
Gene end: 11353469
  
Corresponding Affymetrix probe sets: Dr.21248.1.A1_at (Zebrafish Array)   NM_001076567_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000123209
Ensembl peptide - ENSDARP00000146639
Ensembl peptide - ENSDARP00000086543
NCBI entrez gene - 560688     See in Manteia.
RefSeq - NM_001076567
RefSeq Peptide - NP_001070035
swissprot - E9QCP6
swissprot - F1QDM3
ZFIN ID - ZDB-GENE-060929-440
Ensembl - ENSDARG00000063194
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LIN54ENSGALG00000011133Gallus gallus
 LIN54ENSG00000189308Homo sapiens
 Lin54ENSMUSG00000035310Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tesmin / testis expressed metallothionein like protein / Q9WTJ6* / Q9Y4I5* / testis expressed metallothionein like*ENSDARG0000009766217


Protein motifs (from Interpro)
Interpro ID Name
 IPR005172  CRC domain
 IPR028307  Lin-54 family
 IPR033467  Tesmin/TSO1-like CXC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
G0 and Early G1


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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