ENSMUSG00000035310


Mus musculus

Features
Gene ID: ENSMUSG00000035310
  
Biological name :Lin54
  
Synonyms : Lin54 / Mus musculus lin-54 homolog (C. elegans) (Lin54), transcript variant 3, mRNA. / Q571G4
  
Possible biological names infered from orthology : lin-54 DREAM MuvB core complex component / Q6MZP7
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: E4
Gene start: 100441918
Gene end: 100500639
  
Corresponding Affymetrix probe sets: 10531707 (MoGene1.0st)   1435181_at (Mouse Genome 430 2.0 Array)   1458582_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000120644
Ensembl peptide - ENSMUSP00000121137
Ensembl peptide - ENSMUSP00000123544
Ensembl peptide - ENSMUSP00000123425
Ensembl peptide - ENSMUSP00000121902
Ensembl peptide - ENSMUSP00000041374
Ensembl peptide - ENSMUSP00000118673
Ensembl peptide - ENSMUSP00000119322
Ensembl peptide - ENSMUSP00000120010
NCBI entrez gene - 231506     See in Manteia.
MGI - MGI:2140902
RefSeq - XM_011249429
RefSeq - XM_006534884
RefSeq - XM_006534883
RefSeq - XM_011249428
RefSeq - XM_011249427
RefSeq - NM_001115010
RefSeq - NM_001346583
RefSeq - NM_172714
RefSeq - XM_017320848
RefSeq - XM_006534886
RefSeq Peptide - NP_001333512
RefSeq Peptide - NP_001108482
RefSeq Peptide - NP_766302
swissprot - Q571G4
swissprot - E9Q8B7
swissprot - D6RJL6
swissprot - F6XQ46
swissprot - E9PUI8
swissprot - E9PV28
Ensembl - ENSMUSG00000035310
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lin54ENSDARG00000063194Danio rerio
 LIN54ENSGALG00000011133Gallus gallus
 LIN54ENSG00000189308Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9WTJ6 / Tesmin / testis expressed metallothionein like / Q9Y4I5* / testis expressed metallothionein like protein*ENSMUSG0000002490521


Protein motifs (from Interpro)
Interpro ID Name
 IPR005172  CRC domain
 IPR028307  Lin-54 family
 IPR033467  Tesmin/TSO1-like CXC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
G0 and Early G1


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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