ENSDARG00000063215


Danio rerio

Features
Gene ID: ENSDARG00000063215
  
Biological name :lrrc3b
  
Synonyms : A3KNN3 / leucine rich repeat containing 3B / lrrc3b
  
Possible biological names infered from orthology : Q8VCH9 / Q96PB8
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 1606185
Gene end: 1619449
  
Corresponding Affymetrix probe sets: Dr.18976.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000086615
NCBI entrez gene - 100037364     See in Manteia.
RefSeq - NM_001089516
RefSeq Peptide - NP_001082985
swissprot - A3KNN3
ZFIN ID - ZDB-GENE-070410-55
Ensembl - ENSDARG00000063215
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRC3BENSGALG00000011314Gallus gallus
 LRRC3BENSG00000179796Homo sapiens
 Lrrc3bENSMUSG00000045201Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lrrc3ca / leucine rich repeat containing 3CaENSDARG0000007937148
lrrc3 / A8WHP9 / leucine rich repeat containing 3 / Q9BY71* / P59034* / Leucine-rich repeat-containing protein 3 *ENSDARG0000007841545
lrrc3cb / leucine rich repeat containing 3Cb / A6NJW4* / LRRC3C* / leucine rich repeat containing 3C*ENSDARG0000007618627
lrrc17 / leucine rich repeat containing 17 / Q8N6Y2* / Q9CXD9* / Leucine-rich repeat-containing protein 17 *ENSDARG0000003796022


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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