ENSDARG00000037960


Danio rerio

Features
Gene ID: ENSDARG00000037960
  
Biological name :lrrc17
  
Synonyms : leucine rich repeat containing 17 / lrrc17
  
Possible biological names infered from orthology : Leucine-rich repeat-containing protein 17 / Q8N6Y2 / Q9CXD9
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 20141191
Gene end: 20156085
  
Corresponding Affymetrix probe sets: Dr.25268.1.S1_at (Zebrafish Array)   NM_205539_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000055316
NCBI entrez gene - 321202     See in Manteia.
RefSeq - NM_205539
RefSeq Peptide - NP_991102
swissprot - F1R0N0
ZFIN ID - ZDB-GENE-030131-9774
Ensembl - ENSDARG00000037960
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRC17ENSGALG00000008298Gallus gallus
 LRRC17ENSG00000128606Homo sapiens
 Lrrc17ENSMUSG00000039883Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lrrc3ca / leucine rich repeat containing 3CaENSDARG0000007937114
A3KNN3 / lrrc3b / leucine rich repeat containing 3B / Q96PB8*ENSDARG0000006321513
lrrc3 / A8WHP9 / leucine rich repeat containing 3 / Q9BY71* / P59034* / Leucine-rich repeat-containing protein 3 *ENSDARG0000007841512
lrrc3cb / leucine rich repeat containing 3Cb / A6NJW4* / LRRC3C* / leucine rich repeat containing 3C*ENSDARG0000007618610


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr