ENSDARG00000069515


Danio rerio

Features
Gene ID: ENSDARG00000069515
  
Biological name :bbs10
  
Synonyms : Bardet-Biedl syndrome 10 / bbs10
  
Possible biological names infered from orthology : Bardet-Biedl syndrome 10 protein homolog / Q8TAM1 / Q9DBI2
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 7375923
Gene end: 7382059
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000121514
Ensembl peptide - ENSDARP00000092012
Ensembl peptide - ENSDARP00000143740
NCBI entrez gene - 100034535     See in Manteia.
RefSeq - NM_001089463
RefSeq - XM_021467562
RefSeq Peptide - NP_001082932
swissprot - F1Q9F8
swissprot - A0A286Y9A6
swissprot - Q1LX37
ZFIN ID - ZDB-GENE-060503-355
Ensembl - ENSDARG00000069515
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BBS10ENSGALG00000033769Gallus gallus
 BBS10ENSG00000179941Homo sapiens
 Bbs10ENSMUSG00000035759Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002423  Chaperonin Cpn60/TCP-1 family
 IPR017998  Chaperone tailless complex polypeptide 1 (TCP-1)
 IPR027413  GroEL-like equatorial domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007369 gastrulation IMP
 biological_processGO:0060026 convergent extension IMP
 biological_processGO:0060027 convergent extension involved in gastrulation IMP
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000135 notochord notochord increased width , abnormal
notochord kinked , abnormal
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 ZFA:0000155 somite somite increased length , abnormal
somite asymmetrical , abnormal
somite amorphous , abnormal
somite shape , abnormal
somite increased width , abnormal
Show

 ZFA:0001094 whole organism whole organism anterior-posterior axis decreased length , abnormal
whole organism dorsal side decreased thickness , abnormal
whole organism decreased amount , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

 ZFA:0001620 pronephric proximal convoluted tubule pronephric proximal convoluted tubule morphology , abnormal
Show

 ZFA:0005290 proximal convoluted tubule proximal convoluted tubule decreased size , abnormal
proximal convoluted tubule decreased area , abnormal
Show

 ZFA:0009000 cell cell detached from neural tube , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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