ENSDARG00000069981


Danio rerio

Features
Gene ID: ENSDARG00000069981
  
Biological name :cspg5a
  
Synonyms : chondroitin sulfate proteoglycan 5a / cspg5a
  
Possible biological names infered from orthology : chondroitin sulfate proteoglycan 5 / CSPG5 / O95196 / Q71M36
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 42319438
Gene end: 42390640
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000148611
Ensembl peptide - ENSDARP00000093081
Ensembl peptide - ENSDARP00000124012
NCBI entrez gene - 558206     See in Manteia.
swissprot - F6PCZ4
swissprot - F8W3W2
ZFIN ID - ZDB-GENE-080425-4
Ensembl - ENSDARG00000069981
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSPG5ENSGALG00000032184Gallus gallus
 CSPG5ENSG00000114646Homo sapiens
 Cspg5ENSMUSG00000032482Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cspg5b / chondroitin sulfate proteoglycan 5b / CSPG5* / O95196* / Q71M36* / chondroitin sulfate proteoglycan 5*ENSDARG0000009979336


Protein motifs (from Interpro)
Interpro ID Name
 IPR009505  Neural chondroitin sulphate proteoglycan cytoplasmic


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
A tetrasaccharide linker sequence is required for GAG synthesis
Chondroitin sulfate biosynthesis
Dermatan sulfate biosynthesis
CS/DS degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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