ENSDARG00000070266


Danio rerio

Features
Gene ID: ENSDARG00000070266
  
Biological name :spock3
  
Synonyms : sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 / spock3
  
Possible biological names infered from orthology : Q8BKV0 / Q9BQ16 / SPARC/osteonectin, cwcv and kazal like domains proteoglycan 3 / Testican-3
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 20635190
Gene end: 20706296
  
Corresponding Affymetrix probe sets: Dr.11347.1.A1_at (Zebrafish Array)   Dr.12941.1.A1_at (Zebrafish Array)   Dr.19970.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000120641
Ensembl peptide - ENSDARP00000135664
Ensembl peptide - ENSDARP00000123781
Ensembl peptide - ENSDARP00000122103
Ensembl peptide - ENSDARP00000093744
NCBI entrez gene - 562002     See in Manteia.
RefSeq - XM_009307619
RefSeq - XM_017355108
RefSeq - NM_001327987
RefSeq - NM_001327988
RefSeq Peptide - NP_001314916
RefSeq Peptide - NP_001314917
swissprot - E9QJD8
swissprot - E9QHS0
swissprot - A0A0R4IMY5
swissprot - F1RAX3
ZFIN ID - ZDB-GENE-090311-24
Ensembl - ENSDARG00000070266
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SPOCK3ENSGALG00000009568Gallus gallus
 Q9BQ16ENSG00000196104Homo sapiens
 Q8BKV0ENSMUSG00000054162Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
spock1 / si:dkey-201i24.6 / Q08629* / SPARC/osteonectin, cwcv and kazal like domains proteoglycan 1*ENSDARG0000007464444
spock2 / sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 / Q92563* / Q9ER58* / Testican-2 * / SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2*ENSDARG0000007539341


Protein motifs (from Interpro)
Interpro ID Name
 IPR000716  Thyroglobulin type-1
 IPR002350  Kazal domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR019577  SPARC/Testican, calcium-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Activation of Matrix Metalloproteinases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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