ENSGALG00000009568


Gallus gallus

Features
Gene ID: ENSGALG00000009568
  
Biological name :SPOCK3
  
Synonyms : SPARC/osteonectin, cwcv and kazal like domains proteoglycan 3 / SPOCK3
  
Possible biological names infered from orthology : Q8BKV0 / Q9BQ16 / Testican-3
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 24674468
Gene end: 24837683
  
Corresponding Affymetrix probe sets: GgaAffx.6008.1.S1_at (Chicken Array)   GgaAffx.6009.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000015568
Ensembl peptide - ENSGALP00000051465
NCBI entrez gene - 422425     See in Manteia.
RefSeq - XM_420393
RefSeq - XM_003641139
RefSeq - XM_015285309
swissprot - F1P397
Ensembl - ENSGALG00000009568
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 spock3ENSDARG00000070266Danio rerio
 Q9BQ16ENSG00000196104Homo sapiens
 Q8BKV0ENSMUSG00000054162Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SPOCK1 / SPARC/osteonectin, cwcv and kazal like domains proteoglycan 1 / Q08629*ENSGALG0000000625852


Protein motifs (from Interpro)
Interpro ID Name
 IPR000716  Thyroglobulin type-1
 IPR002350  Kazal domain
 IPR011992  EF-hand domain pair
 IPR019577  SPARC/Testican, calcium-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0019800 peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005539 glycosaminoglycan binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr