ENSDARG00000070432


Danio rerio

Features
Gene ID: ENSDARG00000070432
  
Biological name :ino80
  
Synonyms : ino80 / INO80 complex subunit
  
Possible biological names infered from orthology : DNA helicase INO80 / Q6ZPV2 / Q9ULG1
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 28266327
Gene end: 28352352
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000109152
Ensembl peptide - ENSDARP00000145988
Ensembl peptide - ENSDARP00000153890
NCBI entrez gene - 566768     See in Manteia.
RefSeq - XM_009300828
RefSeq - NM_001045119
RefSeq - XM_009300835
RefSeq - XM_009300833
RefSeq Peptide - NP_001038584
swissprot - Q5SPB7
ZFIN ID - ZDB-GENE-041014-72
Ensembl - ENSDARG00000070432
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 INO80ENSGALG00000008553Gallus gallus
 INO80ENSG00000128908Homo sapiens
 Ino80ENSMUSG00000034154Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000330  SNF2-related, N-terminal domain
 IPR001650  Helicase, C-terminal
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR020838  DBINO domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR031047  DNA helicase Ino80


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006338 chromatin remodeling IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0031011 Ino80 complex IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA


Pathways (from Reactome)
Pathway description
UCH proteinases
DNA Damage Recognition in GG-NER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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