ENSGALG00000008553


Gallus gallus

Features
Gene ID: ENSGALG00000008553
  
Biological name :INO80
  
Synonyms : INO80 / INO80 complex subunit
  
Possible biological names infered from orthology : DNA helicase INO80 / Q6ZPV2 / Q9ULG1
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 24449297
Gene end: 24509836
  
Corresponding Affymetrix probe sets: Gga.14152.1.S1_at (Chicken Array)   Gga.14152.1.S1_s_at (Chicken Array)   Gga.17930.1.S1_s_at (Chicken Array)   Gga.8265.1.S1_at (Chicken Array)   GgaAffx.22627.1.S1_at (Chicken Array)   GgaAffx.22627.2.S1_s_at (Chicken Array)   GgaAffx.5388.1.S1_at (Chicken Array)   GgaAffx.5388.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013917
NCBI entrez gene - 423210     See in Manteia.
RefSeq - NM_001199657
RefSeq - XM_015287065
RefSeq - XM_015287066
RefSeq Peptide - NP_001186586
swissprot - F1NYY9
Ensembl - ENSGALG00000008553
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ino80ENSDARG00000070432Danio rerio
 INO80ENSG00000128908Homo sapiens
 Ino80ENSMUSG00000034154Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000330  SNF2-related, N-terminal domain
 IPR001650  Helicase, C-terminal
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR020838  DBINO domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR031047  DNA helicase Ino80


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000070 mitotic sister chromatid segregation IEA
 biological_processGO:0000724 double-strand break repair via homologous recombination IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006302 double-strand break repair IEA
 biological_processGO:0006338 chromatin remodeling IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0010571 positive regulation of nuclear cell cycle DNA replication IEA
 biological_processGO:0030307 positive regulation of cell growth IEA
 biological_processGO:0032508 DNA duplex unwinding IEA
 biological_processGO:0034644 cellular response to UV IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0051225 spindle assembly IEA
 biological_processGO:0070914 UV-damage excision repair IEA
 biological_processGO:0071479 cellular response to ionizing radiation IEA
 biological_processGO:2000045 regulation of G1/S transition of mitotic cell cycle IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0031011 Ino80 complex IEA
 cellular_componentGO:0045111 intermediate filament cytoskeleton IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003678 DNA helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0043014 alpha-tubulin binding IEA


Pathways (from Reactome)
Pathway description
UCH proteinases
DNA Damage Recognition in GG-NER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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