ENSDARG00000070834


Danio rerio

Features
Gene ID: ENSDARG00000070834
  
Biological name :taf13
  
Synonyms : taf13 / TATA-box binding protein associated factor 13
  
Possible biological names infered from orthology : P61216 / Q15543 / Transcription initiation factor TFIID subunit 13
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 20428839
Gene end: 20429741
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000095109
NCBI entrez gene - 324153     See in Manteia.
RefSeq - NM_001004665
RefSeq Peptide - NP_001004665
swissprot - F1QBH2
ZFIN ID - ZDB-GENE-030131-2873
Ensembl - ENSDARG00000070834
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TAF13ENSGALG00000015185Gallus gallus
 TAF13ENSG00000197780Homo sapiens
 Taf13ENSMUSG00000048100Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003195  Transcription initiation factor IID, subunit 13
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 cellular_componentGO:0005669 transcription factor TFIID complex IBA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0003712 transcription coregulator activity IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase II Pre-transcription Events
Regulation of TP53 Activity through Phosphorylation
RNA polymerase II transcribes snRNA genes
RNA Polymerase II Promoter Escape
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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