ENSGALG00000015185


Gallus gallus

Features
Gene ID: ENSGALG00000015185
  
Biological name :TAF13
  
Synonyms : TAF13 / TATA-box binding protein associated factor 13
  
Possible biological names infered from orthology : P61216 / Q15543 / Transcription initiation factor TFIID subunit 13
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 83397226
Gene end: 83400500
  
Corresponding Affymetrix probe sets: Gga.4597.1.S1_at (Chicken Array)   GgaAffx.11857.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000060657
Ensembl peptide - ENSGALP00000063601
Ensembl peptide - ENSGALP00000024457
NCBI entrez gene - 418365     See in Manteia.
RefSeq - NM_001006252
RefSeq Peptide - NP_001006252
swissprot - A0A1L1RXP4
swissprot - Q5ZLI0
Ensembl - ENSGALG00000015185
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 taf13ENSDARG00000070834Danio rerio
 TAF13ENSG00000197780Homo sapiens
 Taf13ENSMUSG00000048100Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003195  Transcription initiation factor IID, subunit 13
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005669 transcription factor TFIID complex IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IBA
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase II Pre-transcription Events
RNA polymerase II transcribes snRNA genes
RNA Polymerase II Promoter Escape
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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