ENSDARG00000074002


Danio rerio

Features
Gene ID: ENSDARG00000074002
  
Biological name :slc6a11a
  
Synonyms : slc6a11a / solute carrier family 6 (neurotransmitter transporter), member 11a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 40629066
Gene end: 40646203
  
Corresponding Affymetrix probe sets: Dr.8342.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000094532
NCBI entrez gene - 558960     See in Manteia.
RefSeq - NM_001098387
RefSeq Peptide - NP_001091857
swissprot - A5D8R6
ZFIN ID - ZDB-GENE-030131-3729
Ensembl - ENSDARG00000074002
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc6a22.2 / solute carrier family 6 member 22, tandem duplicate 2ENSDARG0000000135463
slc6a22.1 / solute carrier family 6 member 22, tandem duplicate 1ENSDARG0000000073061
SLC6A13 / solute carrier family 6 member 13 / Q9NSD5*ENSDARG0000006756760
zgc:158427ENSDARG0000006837256
slc6a11b / solute carrier family 6 (neurotransmitter transporter), member 11b / P48066* / P31650* / SLC6A11* / solute carrier family 6 member 11* / Sodium- and chloride-dependent GABA transporter 3 *ENSDARG0000008798156
si:ch211-132b12.6ENSDARG0000009454656
si:ch211-132b12.2ENSDARG0000009494656
si:ch211-132b12.1ENSDARG0000006148055
si:ch211-132b12.3ENSDARG0000006836354
slc6a6b / solute carrier family 6 (neurotransmitter transporter), member 6b / P31641* / SLC6A6* / solute carrier family 6 member 6*ENSDARG0000009843854
slc6a6a / solute carrier family 6 (neurotransmitter transporter), member 6a / P31641* / SLC6A6* / O35316* / solute carrier family 6 member 6* / solute carrier family 6 (neurotransmitter tra...ENSDARG0000001253453
slc6a8 / solute carrier family 6 (neurotransmitter transporter), member 8 / Q8VBW1* / P48029* / solute carrier family 6 member 8* / solute carrier family 6 (neurotransmitter transporter, cr...ENSDARG0000004364651
si:ch211-117c9.5ENSDARG0000007123549
slc6a1a / solute carrier family 6 (neurotransmitter transporter), member 1a / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000004594448
slc6a1b / solute carrier family 6 (neurotransmitter transporter), member 1b / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000003964747
slc6a1l / solute carrier family 6 (neurotransmitter transporter, GABA), member 1, likeENSDARG0000004120547
slc6a5 / solute carrier family 6 (neurotransmitter transporter), member 5 / Q9Y345* / solute carrier family 6 member 5* / solute carrier family 6 (neurotransmitter transporter, glycine), member 5*ENSDARG0000006796443
slc6a2 / solute carrier family 6 (neurotransmitter transporter), member 2 / P23975* / O55192* / solute carrier family 6 member 2* / solute carrier family 6 (neurotransmitter transporter, no...ENSDARG0000001614140
slc6a9 / solute carrier family 6 (neurotransmitter transporter, glycine), member 9 / P48067* / P28571* / solute carrier family 6 member 9* / Sodium- and chloride-dependent glycine transporter 1 *ENSDARG0000001853440
slc6a14 / solute carrier family 6 (amino acid transporter), member 14 / Q9UN76* / Q9JMA9* / solute carrier family 6 member 14* / Sodium- and chloride-dependent neutral and basic amino acid ...ENSDARG0000002986640


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IBA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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