ENSDARG00000016141


Danio rerio

Features
Gene ID: ENSDARG00000016141
  
Biological name :slc6a2
  
Synonyms : slc6a2 / solute carrier family 6 (neurotransmitter transporter), member 2
  
Possible biological names infered from orthology : O55192 / P23975 / solute carrier family 6 member 2 / solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 35348471
Gene end: 35380186
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124452
Ensembl peptide - ENSDARP00000151551
NCBI entrez gene - 565776     See in Manteia.
swissprot - F1R3H6
ZFIN ID - ZDB-GENE-110408-4
Ensembl - ENSDARG00000016141
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC6A2ENSGALG00000003560Gallus gallus
 P23975ENSG00000103546Homo sapiens
 O55192ENSMUSG00000055368Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc6a3 / solute carrier family 6 (neurotransmitter transporter), member 3 / Q01959* / solute carrier family 6 member 3*ENSDARG0000000421963
slc6a4b / solute carrier family 6 (neurotransmitter transporter), member 4bENSDARG0000005701749
slc6a4a / solute carrier family 6 (neurotransmitter transporter), member 4a / Q60857* / SLC6A4* / P31645* / solute carrier family 6 member 4* / Sodium-dependent serotonin transporter *ENSDARG0000006116546
slc6a6a / solute carrier family 6 (neurotransmitter transporter), member 6a / P31641* / SLC6A6* / O35316* / solute carrier family 6 member 6* / solute carrier family 6 (neurotransmitter tra...ENSDARG0000001253441
slc6a1b / solute carrier family 6 (neurotransmitter transporter), member 1b / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000003964741
slc6a8 / solute carrier family 6 (neurotransmitter transporter), member 8 / Q8VBW1* / P48029* / solute carrier family 6 member 8* / solute carrier family 6 (neurotransmitter transporter, cr...ENSDARG0000004364641
slc6a1a / solute carrier family 6 (neurotransmitter transporter), member 1a / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000004594441
slc6a5 / solute carrier family 6 (neurotransmitter transporter), member 5 / Q9Y345* / solute carrier family 6 member 5* / solute carrier family 6 (neurotransmitter transporter, glycine), member 5*ENSDARG0000006796441
slc6a22.1 / solute carrier family 6 member 22, tandem duplicate 1ENSDARG0000000073040
slc6a22.2 / solute carrier family 6 member 22, tandem duplicate 2ENSDARG0000000135440
SLC6A13 / solute carrier family 6 member 13 / Q9NSD5*ENSDARG0000006756740
si:ch211-117c9.5ENSDARG0000007123540
si:ch211-132b12.6ENSDARG0000009454640
slc6a6b / solute carrier family 6 (neurotransmitter transporter), member 6b / P31641* / SLC6A6* / solute carrier family 6 member 6*ENSDARG0000009843840
zgc:158225 / Q99884* / SLC6A7* / Q6PGE7* / solute carrier family 6 member 7* / Sodium-dependent proline transporter *ENSDARG0000003000639
si:ch211-132b12.1ENSDARG0000006148039
si:ch211-132b12.3ENSDARG0000006836339
zgc:158427ENSDARG0000006837239
slc6a14 / solute carrier family 6 (amino acid transporter), member 14 / Q9UN76* / Q9JMA9* / solute carrier family 6 member 14* / Sodium- and chloride-dependent neutral and basic amino acid ...ENSDARG0000002986638
slc6a1l / solute carrier family 6 (neurotransmitter transporter, GABA), member 1, likeENSDARG0000004120538


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0015874 norepinephrine transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043005 neuron projection IBA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0005333 norepinephrine transmembrane transporter activity IBA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Na+/Cl- dependent neurotransmitter transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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