ENSDARG00000004219


Danio rerio

Features
Gene ID: ENSDARG00000004219
  
Biological name :slc6a3
  
Synonyms : slc6a3 / solute carrier family 6 (neurotransmitter transporter), member 3
  
Possible biological names infered from orthology : Q01959 / Q61327 / Sodium-dependent dopamine transporter / solute carrier family 6 member 3
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 248239
Gene end: 263658
  
Corresponding Affymetrix probe sets: Dr.12382.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000111850
swissprot - F1QGM4
ZFIN ID - ZDB-GENE-010316-1
Ensembl - ENSDARG00000004219
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q01959ENSG00000142319Homo sapiens
 Q61327ENSMUSG00000021609Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc6a2 / solute carrier family 6 (neurotransmitter transporter), member 2 / P23975* / O55192* / solute carrier family 6 member 2* / solute carrier family 6 (neurotransmitter transporter, no...ENSDARG0000001614163
slc6a4b / solute carrier family 6 (neurotransmitter transporter), member 4bENSDARG0000005701745
slc6a4a / solute carrier family 6 (neurotransmitter transporter), member 4a / Q60857* / SLC6A4* / P31645* / solute carrier family 6 member 4* / Sodium-dependent serotonin transporter *ENSDARG0000006116544
SLC6A13 / solute carrier family 6 member 13 / Q9NSD5*ENSDARG0000006756739
slc6a6a / solute carrier family 6 (neurotransmitter transporter), member 6a / P31641* / SLC6A6* / O35316* / solute carrier family 6 member 6* / solute carrier family 6 (neurotransmitter tra...ENSDARG0000001253438
slc6a1b / solute carrier family 6 (neurotransmitter transporter), member 1b / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000003964738
slc6a8 / solute carrier family 6 (neurotransmitter transporter), member 8 / Q8VBW1* / P48029* / solute carrier family 6 member 8* / solute carrier family 6 (neurotransmitter transporter, cr...ENSDARG0000004364638
slc6a1a / solute carrier family 6 (neurotransmitter transporter), member 1a / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000004594438
si:ch211-132b12.6ENSDARG0000009454638
slc6a6b / solute carrier family 6 (neurotransmitter transporter), member 6b / P31641* / SLC6A6* / solute carrier family 6 member 6*ENSDARG0000009843838
slc6a22.2 / solute carrier family 6 member 22, tandem duplicate 2ENSDARG0000000135437
zgc:158225 / Q99884* / SLC6A7* / Q6PGE7* / solute carrier family 6 member 7* / Sodium-dependent proline transporter *ENSDARG0000003000637
slc6a1l / solute carrier family 6 (neurotransmitter transporter, GABA), member 1, likeENSDARG0000004120537
si:ch211-132b12.1ENSDARG0000006148037
slc6a5 / solute carrier family 6 (neurotransmitter transporter), member 5 / Q9Y345* / solute carrier family 6 member 5* / solute carrier family 6 (neurotransmitter transporter, glycine), member 5*ENSDARG0000006796437
si:ch211-132b12.3ENSDARG0000006836337
zgc:158427ENSDARG0000006837237
slc6a11a / solute carrier family 6 (neurotransmitter transporter), member 11aENSDARG0000007400237
slc6a11b / solute carrier family 6 (neurotransmitter transporter), member 11b / P48066* / P31650* / SLC6A11* / solute carrier family 6 member 11* / Sodium- and chloride-dependent GABA transporter 3 *ENSDARG0000008798137
slc6a22.1 / solute carrier family 6 member 22, tandem duplicate 1ENSDARG0000000073036


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Dopamine clearance from the synaptic cleft
Na+/Cl- dependent neurotransmitter transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism morphology , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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