ENSDARG00000030006


Danio rerio

Features
Gene ID: ENSDARG00000030006
  
Biological name :zgc:158225
  
Synonyms : zgc:158225
  
Possible biological names infered from orthology : Q6PGE7 / Q99884 / SLC6A7 / Sodium-dependent proline transporter / solute carrier family 6 member 7
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 30794351
Gene end: 30830901
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119411
NCBI entrez gene - 562050     See in Manteia.
RefSeq - NM_001080580
RefSeq - XM_005161302
RefSeq Peptide - NP_001074049
swissprot - F1R3N3
ZFIN ID - ZDB-GENE-070112-1492
Ensembl - ENSDARG00000030006
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000027982Gallus gallus
 Q99884ENSG00000011083Homo sapiens
 Q6PGE7ENSMUSG00000052026Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc6a5 / solute carrier family 6 (neurotransmitter transporter), member 5 / Q9Y345* / solute carrier family 6 member 5* / solute carrier family 6 (neurotransmitter transporter, glycine), member 5*ENSDARG0000006796442
slc6a9 / solute carrier family 6 (neurotransmitter transporter, glycine), member 9 / P48067* / P28571* / solute carrier family 6 member 9* / Sodium- and chloride-dependent glycine transporter 1 *ENSDARG0000001853441
slc6a14 / solute carrier family 6 (amino acid transporter), member 14 / Q9UN76* / Q9JMA9* / solute carrier family 6 member 14* / Sodium- and chloride-dependent neutral and basic amino acid ...ENSDARG0000002986640
slc6a1b / solute carrier family 6 (neurotransmitter transporter), member 1b / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000003964738
slc6a1a / solute carrier family 6 (neurotransmitter transporter), member 1a / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000004594438
slc6a22.1 / solute carrier family 6 member 22, tandem duplicate 1ENSDARG0000000073037
slc6a22.2 / solute carrier family 6 member 22, tandem duplicate 2ENSDARG0000000135437
slc6a6a / solute carrier family 6 (neurotransmitter transporter), member 6a / P31641* / SLC6A6* / O35316* / solute carrier family 6 member 6* / solute carrier family 6 (neurotransmitter tra...ENSDARG0000001253437
slc6a2 / solute carrier family 6 (neurotransmitter transporter), member 2 / P23975* / O55192* / solute carrier family 6 member 2* / solute carrier family 6 (neurotransmitter transporter, no...ENSDARG0000001614137
slc6a4b / solute carrier family 6 (neurotransmitter transporter), member 4bENSDARG0000005701737
slc6a4a / solute carrier family 6 (neurotransmitter transporter), member 4a / Q60857* / SLC6A4* / P31645* / solute carrier family 6 member 4* / Sodium-dependent serotonin transporter *ENSDARG0000006116537
SLC6A13 / solute carrier family 6 member 13 / Q9NSD5*ENSDARG0000006756737
slc6a1l / solute carrier family 6 (neurotransmitter transporter, GABA), member 1, likeENSDARG0000004120536
slc6a8 / solute carrier family 6 (neurotransmitter transporter), member 8 / Q8VBW1* / P48029* / solute carrier family 6 member 8* / solute carrier family 6 (neurotransmitter transporter, cr...ENSDARG0000004364636
si:ch211-132b12.6ENSDARG0000009454636
slc6a6b / solute carrier family 6 (neurotransmitter transporter), member 6b / P31641* / SLC6A6* / solute carrier family 6 member 6*ENSDARG0000009843836
slc6a3 / solute carrier family 6 (neurotransmitter transporter), member 3 / Q01959* / solute carrier family 6 member 3*ENSDARG0000000421935
si:ch211-132b12.1ENSDARG0000006148035
si:ch211-132b12.3ENSDARG0000006836335
zgc:158427ENSDARG0000006837235


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IBA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Na+/Cl- dependent neurotransmitter transporters
Creatine metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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