ENSDARG00000057017


Danio rerio

Features
Gene ID: ENSDARG00000057017
  
Biological name :slc6a4b
  
Synonyms : slc6a4b / solute carrier family 6 (neurotransmitter transporter), member 4b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 19969794
Gene end: 19988772
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000081315
NCBI entrez gene - 664770     See in Manteia.
RefSeq - NM_001177459
RefSeq Peptide - NP_001170930
swissprot - B3DJ31
ZFIN ID - ZDB-GENE-060314-2
Ensembl - ENSDARG00000057017
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc6a4a / solute carrier family 6 (neurotransmitter transporter), member 4a / Q60857* / SLC6A4* / P31645* / solute carrier family 6 member 4* / Sodium-dependent serotonin transporter *ENSDARG0000006116567
slc6a2 / solute carrier family 6 (neurotransmitter transporter), member 2 / P23975* / O55192* / solute carrier family 6 member 2* / solute carrier family 6 (neurotransmitter transporter, no...ENSDARG0000001614152
slc6a3 / solute carrier family 6 (neurotransmitter transporter), member 3 / Q01959* / solute carrier family 6 member 3*ENSDARG0000000421948
slc6a8 / solute carrier family 6 (neurotransmitter transporter), member 8 / Q8VBW1* / P48029* / solute carrier family 6 member 8* / solute carrier family 6 (neurotransmitter transporter, cr...ENSDARG0000004364642
slc6a5 / solute carrier family 6 (neurotransmitter transporter), member 5 / Q9Y345* / solute carrier family 6 member 5* / solute carrier family 6 (neurotransmitter transporter, glycine), member 5*ENSDARG0000006796442
slc6a22.1 / solute carrier family 6 member 22, tandem duplicate 1ENSDARG0000000073041
slc6a22.2 / solute carrier family 6 member 22, tandem duplicate 2ENSDARG0000000135441
slc6a6a / solute carrier family 6 (neurotransmitter transporter), member 6a / P31641* / SLC6A6* / O35316* / solute carrier family 6 member 6* / solute carrier family 6 (neurotransmitter tra...ENSDARG0000001253441
slc6a1b / solute carrier family 6 (neurotransmitter transporter), member 1b / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000003964741
slc6a1a / solute carrier family 6 (neurotransmitter transporter), member 1a / P31648* / SLC6A1* / P30531* / solute carrier family 6 member 1* / Sodium- and chloride-dependent GABA transporter 1 *ENSDARG0000004594441
si:ch211-132b12.3ENSDARG0000006836341
zgc:158427ENSDARG0000006837241
si:ch211-117c9.5ENSDARG0000007123541
si:ch211-132b12.6ENSDARG0000009454641
slc6a6b / solute carrier family 6 (neurotransmitter transporter), member 6b / P31641* / SLC6A6* / solute carrier family 6 member 6*ENSDARG0000009843841
zgc:158225 / Q99884* / SLC6A7* / Q6PGE7* / solute carrier family 6 member 7* / Sodium-dependent proline transporter *ENSDARG0000003000640
si:ch211-132b12.1ENSDARG0000006148040
SLC6A13 / solute carrier family 6 member 13 / Q9NSD5*ENSDARG0000006756740
slc6a11a / solute carrier family 6 (neurotransmitter transporter), member 11aENSDARG0000007400240
slc6a14 / solute carrier family 6 (amino acid transporter), member 14 / Q9UN76* / Q9JMA9* / solute carrier family 6 member 14* / Sodium- and chloride-dependent neutral and basic amino acid ...ENSDARG0000002986639


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0006837 serotonin transport IEA
 biological_processGO:0051583 dopamine uptake involved in synaptic transmission IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043005 neuron projection IBA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0005330 dopamine:sodium symporter activity IBA
 molecular_functionGO:0015222 serotonin transmembrane transporter activity ISS
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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