ENSDARG00000074129


Danio rerio

Features
Gene ID: ENSDARG00000074129
  
Biological name :edem3
  
Synonyms : edem3 / ER degradation enhancer, mannosidase alpha-like 3
  
Possible biological names infered from orthology : ER degradation enhancing alpha-mannosidase like protein 3 / Q2HXL6 / Q9BZQ6
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 19469678
Gene end: 19487327
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000100688
NCBI entrez gene - 559811     See in Manteia.
swissprot - F1Q540
ZFIN ID - ZDB-GENE-070801-5
Ensembl - ENSDARG00000074129
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EDEM3ENSGALG00000004806Gallus gallus
 EDEM3ENSG00000116406Homo sapiens
 Edem3ENSMUSG00000043019Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-282j22.3ENSDARG0000001052454
edem1 / ER degradation enhancer, mannosidase alpha-like 1 / Q925U4* / Q92611* / ER degradation enhancing alpha-mannosidase like protein 1*ENSDARG0000002509426
edem2 / ER degradation enhancer, mannosidase alpha-like 2 / Q9BV94* / ER degradation enhancing alpha-mannosidase like protein 2*ENSDARG0000002844825


Protein motifs (from Interpro)
Interpro ID Name
 IPR001382  Glycoside hydrolase family 47
 IPR003137  PA domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006491 N-glycan processing IBA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0030968 endoplasmic reticulum unfolded protein response IBA
 biological_processGO:0097466 ubiquitin-dependent glycoprotein ERAD pathway IBA
 biological_processGO:1904382 mannose trimming involved in glycoprotein ERAD pathway IEA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IBA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA


Pathways (from Reactome)
Pathway description
ER Quality Control Compartment (ERQC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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