ENSDARG00000074378


Danio rerio

Features
Gene ID: ENSDARG00000074378
  
Biological name :junba
  
Synonyms : junba / JunB proto-oncogene, AP-1 transcription factor subunit a
  
Possible biological names infered from orthology : JUNB / JunB proto-oncogene, AP-1 transcription factor subunit / P09450 / P17275 / Transcription factor jun-B
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 51732979
Gene end: 51734535
  
Corresponding Affymetrix probe sets: Dr.10326.1.S1_at (Zebrafish Array)   NM_213556_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000109347
Ensembl peptide - ENSDARP00000125219
NCBI entrez gene - 407086     See in Manteia.
RefSeq - NM_213556
RefSeq Peptide - NP_998721
swissprot - H0WEE2
swissprot - A8E7N0
ZFIN ID - ZDB-GENE-040426-2172
Ensembl - ENSDARG00000074378
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 JUNBENSG00000171223Homo sapiens
 JunbENSMUSG00000052837Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
junbb / JunB proto-oncogene, AP-1 transcription factor subunit b / JUNB* / P09450* / P17275* / Transcription factor jun-B * / JunB proto-oncogene, AP-1 transcription factor subunit*ENSDARG0000010477368
jun / Jun proto-oncogene, AP-1 transcription factor subunit / P05412* / P05627* / jun proto-oncogene*ENSDARG0000004353149
jund / JunD proto-oncogene, AP-1 transcription factor subunit / P15066* / P17535* / Transcription factor jun-D *ENSDARG0000006785040
june / JunE proto-oncogene, AP-1 transcription factor subunitENSDARG0000010409040


Protein motifs (from Interpro)
Interpro ID Name
 IPR002112  Transcription factor Jun
 IPR004827  Basic-leucine zipper domain
 IPR005643  Jun-like transcription factor
 IPR008917  Transcription factor, Skn-1-like, DNA-binding domain superfamily
 IPR029822  Transcription factor JunB


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0001945 lymph vessel development IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0009314 response to radiation IBA
 biological_processGO:0009612 response to mechanical stimulus IBA
 biological_processGO:0010941 regulation of cell death IBA
 biological_processGO:0032496 response to lipopolysaccharide IBA
 biological_processGO:0032870 cellular response to hormone stimulus IBA
 biological_processGO:0034097 response to cytokine IBA
 biological_processGO:0042127 regulation of cell proliferation IBA
 biological_processGO:0042493 response to drug IBA
 biological_processGO:0045597 positive regulation of cell differentiation IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:0051591 response to cAMP IBA
 biological_processGO:0051726 regulation of cell cycle IEA
 biological_processGO:0060047 heart contraction IMP
 cellular_componentGO:0000790 nuclear chromatin IBA
 cellular_componentGO:0005667 transcription factor complex IBA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003713 transcription coactivator activity IBA
 molecular_functionGO:0008134 transcription factor binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000009 cardiac ventricle cardiac ventricle dilated , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000114 heart heart non-functional , abnormal
Show

 ZFA:0005110 thoracic duct thoracic duct absent , abnormal
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 ZFA:0009395 vascular lymphangioblast vascular lymphangioblast absent , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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