ENSDARG00000075048


Danio rerio
zincfingerring-typedomainlonrf1superfamilytetratricopeptidelonsubstrate-bindingtetratricopeptide-likehelicalrepeat-containingringfyvephd-typepua-likeconservedsiterepeatzinc-fingerlishdimerisationmotifmetalionbinding

Features
Gene ID: ENSDARG00000075048
  
Biological name :lonrf1
  
Synonyms : LON peptidase N-terminal domain and ring finger 1 / lonrf1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 34068075
Gene end: 34092744
  
Corresponding Affymetrix probe sets: Dr.23741.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000113687
NCBI entrez gene - 560773     See in Manteia.
RefSeq - XM_021474313
RefSeq - XM_021481225
RefSeq - XM_684170
swissprot - E9QIP2
ZFIN ID - ZDB-GENE-101021-4
Ensembl - ENSDARG00000075048
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000004078Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lonrf1l / LON peptidase N-terminal domain and ring finger 1, like / LONRF1* / Q17RB8* / LON peptidase N-terminal domain and ring finger 1*ENSDARG0000007856741
si:ch1073-440b2.1 / LONRF2* / Q1L5Z9* / LON peptidase N-terminal domain and ring finger 2*ENSDARG0000008913834


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR003111  Lon, substrate-binding domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR015947  PUA-like superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR019734  Tetratricopeptide repeat
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
ion bindingion bindingion bindingion bindingion bindingion bindingion bindingion bindingion bindingion bindingion bindingion binding
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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